Dortmund missed out on a huge opportunity to win the Bundesliga title after they were held to a 2-2 draw by Mainz on the last day of the season.
Dortmund required a success to seal their very first German topflight title in 11 years, or hope that other outcomes, consisting of Bayern's, enter their favour.
Bayern turned things around in the last minutes to beat Koln 2-1 in an awesome encounter to complete at the top of the league on objective distinction.
An 89th-minute winner by Jamal Musiala sealed the triumph for Bayern and handed the Thomas Tuchel side an 11th Bundesliga title.
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A Koln charge in the 82nd minute had actually counteracted Kingsley Coman's earlier strike, however Musiala sent out the away fans wild with the late winner.
Dortmund's gamers and fans were left dejected in spite of returning from 2-0 down at the break, with Sebastian Haller likewise having a first-half charge conserved.
The win for Bayern marked an effective end to the season for manager Tuchel, who changed Julian Nagelsmann in March.
Tuchel is the seventh various supervisor to win the Bundesliga title with Bayern in the last 8 seasons, after Pep Guardiola, Carlo Ancelotti, Jupp Heynckes, Niko Kovac, Hansi Flick (two times) and Nagelsman.
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